Crystal Structure of Antitubercular Complex: <Emphasis Type="Italic">cis</Emphasis>-(chloro)-[<Emphasis Type="Italic">N,N</Emphasis>′-<Emphasis Type="Italic">bis</Emphasis>-(diethyl-2,2′-bipyridine-3,3′-dicarboxylate)]ruthenium(II) Monohydrate

Abstract  Diethyl-2,2′-bipyridine-3,3′-dicarboxylate (3 or L) reacts with RuCl₃ · 3H₂O to give cis-(Cl)-[Ru(L)₂Cl₂] · H₂O (4) and structure of the complex was determined by spectral (IR, ¹H-NMR), and mass spectroscopic data, elemental analyses and X-ray crystallography. The structure is solved in triclinic, space group p-1 with a = 10.658 (2), b = 12.446 (3), c = 14.186 (5) ?, α = 104.856 (3), β = 108.704 (3), γ = 94.973 (2)°, V = 1693.2 (8) ?³, Z = 2 with final R = 0.012. The geometry of the complex is shown to be a distorted octahedral with four nitrogens of two 2,2′-bipyridyl ligands in two different planes with Ru–N distance as 2.021 (2)−2.071 (3) ?. The cis-position is occupied by two chloride atoms with Ru–Cl distance as 2.4156 (12) and 2.4167 (13) ?. The trans-axial Cl2–Ru1–N and Cl1–Ru1–N4 angles are respectively, 172.42 (7) and 174.12 (7)°. A weak hydrogen bonding is observed between the two chlorides and hydrogens of neighbouring molecule [C–H···Cl distance as 2.72, 2.77 (4) ?]. A second type of weak hydrogen bonding is also observed between the oxygens of carboxylate groups and hydrogens of a neighbouring molecule [C–H···O distance as 2.53, 2.56 and 2.34 (4) ?]. Graphical Abstract  The structure of anti-tubercular precursor complexes, cis-(chloro)-[N,N′-bis-(diethyl-2,2′-bipyridine-3,3′-dicarboxylate)]ruthenium(II) monohydrate is solved by single crystal X-ray diffraction analysis which reveals geometry of the complex to be a distorted octahedral with four nitrogens of two 2,2′-bipyridyl ligands in two different planes. The cis-position is occupied by two chloride atoms.      

“Hummingbird” Behaviour of N‐Heterocyclic Carbenes Stabilises Out‐of‐Plane Bonding of AuCl and CuCl Units

An N‐heterocyclic carbene substituted by two expanded 9‐ethyl‐9‐fluorenyl groups was shown to bind an AuCl unit in an unusual manner, namely with the Au?X rod sitting out of the plane defined by the heterocyclic carbene unit. As shown by X‐ray studies and DFT calculations, the observed large pitch angle (21°) arises from an easy displacement of the gold(I) atom away from the carbene lone‐pair axis, combined with the stabilisation provided by weak CH???Au interactions involving aliphatic and aromatic H atoms of the NHC wingtips. Weak, intermolecular Cl???H bonds are likely to cooperate with the H???Au interactions to stabilise the out‐of‐plane conformation. A general belief until now was that tilt angles in NHC complexes arise mainly from steric effects within the first coordination sphere.     

A convenient one-pot synthesis of boroxoles from diboronic acid

The preparation of the boroxole motif traditionally relies on a 3-step process and the use of n-butyl lithium that can limit substrate scope. Herein during our exploration toward novel RORγ inhibitors, we identified a convenient one-pot preparation of the motif in good yields with good substrate scope.     

Efficient asymmetric hydrogenation of olefins with hydrazine-derived diphosphoramidites

Enantiopure, BINOL-derived diphosphoramidites built upon an achiral hydrazine spacer are efficient ligands for the hydrogenation of 2-(acetylamino)-3-(aryl)-propenoic methyl esters. The activity and enantioselectivity of the hydrazine derivatives were shown to be markedly influenced by the nature of the two NR substituents, symmetrical but bulky R groups leading to the best results. A diphosphosphoramidite obtained from (t)BuHNNH(t)Bu resulted in ee's as high as 95%. The present results contradict previous reports on "short" diphosphoramidites.     

2-Aminobenzamide and 2-Aminobenzoic Acid as New MALDI Matrices Inducing Radical Mediated In-Source Decay of Peptides and Proteins

One of the mechanisms leading to MALDI in-source decay (MALDI ISD) is the transfer of hydrogen radicals to analytes upon laser irradiation. Analytes such as peptides or proteins may undergo ISD and this method can therefore be exploited for top-down sequencing. When performed on peptides, radical-induced ISD results in production of c- and z-ions, as also found in ETD and ECD activation. Here, we describe two new compounds which, when used as MALDI matrices, are able to efficiently induce ISD of peptides and proteins: 2-aminobenzamide and 2-aminobenzoic acid. In-source reduction of the disulfide bridge containing peptide Calcitonin further confirmed the radicalar mechanism of the ISD process. ISD of peptides led, in addition to c- and z-ions, to the generation of a-, x-, and y-ions both in positive and in negative ion modes. Finally, good sequence coverage was obtained for the sequencing of myoglobin (17 kDa protein), confirming the effectiveness of both 2-aminobenzamide and 2-aminobenzoic acid as MALDI ISD matrices.     

Porphyrin-templated synthetic G-quartet (PorphySQ): a second prototype of G-quartet-based G-quadruplex ligand

Template-assembled synthetic G-quartet (TASQ) has been reported recently as a G-quadruplex ligand interacting with DNA according to an unprecedented, nature-inspired 'like likes like' approach, based on the association between two G-quartets, one being native (quadruplex) and the other one artificial (ligand). Herein, a novel TASQ-based ligand is designed, synthesized and its quadruplex-recognition properties are evaluated in vitro: PorphySQ (for porphyrin-templated synthetic G-quartet) displays enhanced quadruplex recognition properties as compared to the very first reported prototype (DOTASQ, for DOTA-templated synthetic G-quartet), since the porphyrin template insures a more stable intramolecular G-quartet fold due to self-stabilizing interactions that may take place intramolecularly between the porphyrin ring and the formed G-quartet.     

Transport of long neutral polymers in the semidilute regime through a protein nanopore

We investigate the entrance of single poly(ethylene glycol) chains into an α-hemolysin channel. We detect the frequency and duration of the current blockades induced by large neutral polymers, where chain radius is larger than pore diameter. In the semidilute regime, these chains pass only if the monomer concentration is larger than a well-defined threshold. Experiments are performed in a very large domain of concentration and molecular mass, up to 35% and 200 kDa, respectively, which was previously unexplored. The variation of the dwell time as a function of molecular mass shows that the chains are extracted from the semidilute solution in contact with the pore by a reptation mechanism.     

Electron-rich iron/ruthenium arylalkynyl complexes for third-order nonlinear optics: redox-switching between three states

The new [(η(2)-dppe)(η(5)-C(5)Me(5))Fe(C≡C-1,4-C(6)H(4)C≡C)Ru(η(2) -dppe)(2) C≡C(C(6)H(5))] complex (3-H) and its hexanuclear relative [{(η(2)-dppe)(η(5)-C(5) Me(5))Fe(C≡C-1,4-C(6)H(4)-C≡C)Ru(η(2)-dppe)(2)(C≡C-1,4-C(6)H(4)C≡C)(3)(1,3,5-C(6)H(3))] (4) have been synthesized and characterized. The linear and cubic nonlinear optical properties of these compounds in their various redox states have been studied along with those of the analogous complexes [(η(2)-dppe)(η(5)-C(5)Me(5))Fe(C≡C-1,4-C(6)H(4)C≡C)Ru(η(2)-dppe)(2)R][PF(6)](n) (n=0-2; R=Cl, 2-Cl; R=C≡C(4-C(6)H(4)NO(2)),3-NO(2)). We show that molecules exhibiting large third-order nonlinearities can be obtained by assembling such dinuclear Fe/Ru units around a central 1,3,5-substituted C(6)H(3) core. These data are discussed with a particular emphasis on the large changes in their nonlinear (third-order) optical properties brought about by oxidation. Experimental and computational (DFT) evidence for the electronic structures of these compounds in their various redox states is presented using 3-H(n+) as a prototypical model. Single crystals of this complex in its mono-oxidized state (3-H[PF(6)]) provide the first structural data for such carbon-rich Fe(III) /Ru(II) heteronuclear mixed-valent (MV) systems. Although experimental evidence for the structure of the dioxidized states was more difficult to obtain, the theoretical study reveals that 3-H(2+) can be considered to have a biradical structure with two independent spins. The low-lying absorptions that appear in the near-infrared (NIR) range for all these compounds following oxidation correspond to intervalence charge-transfer (IVCT) bands for the mono-oxidized states and to ligand-to-metal charge-transfer (LMCT) transitions for the dioxidized states. These play a crucial role in the strong optical modulation achieved. The possibility of accessing additional states with distinct linear or nonlinear optical properties is also briefly discussed.